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Intracranial Vessel Anatomy (CTA) from TOP-BRAIN Dataset (004)
331 views6 months agoCase and segmentations are taken directly from the TOP-BRAIN dataset (TopBrain Segmentation Challenge for Whole Brain Vessel Anatomy), which is distributed under a license requiring source attribution. This dataset contains voxel annotations for over 40 landmark brain vessel anatomies covering both arteries and veins.If interested, you may display a default 3D view of the segmentations via the settings button in the bottom right corner of the DicomTube player.License: opendata.swiss Open use. Must provide the source. Use for commercial purposes requires permission of the data owner.Citation:TopBrain Challenge: TopBrain Challenge Organizers. (2025). TopBrain Challenge Data Release [Data set]. Zenodo. https://doi.org/10.5281/zenodo.16878417TopCoW Challenge pre-print: Benchmarking the CoW with the TopCoW Challenge: Topology-Aware Anatomical Segmentation of the Circle of Willis for CTA and MRA. Kaiyuan Yang et. al. 2025. arXiv 2312.17670
HeadCT
Intracranial Vessel Anatomy (CTA) from TOP-BRAIN Dataset (003)
87 views6 months agoCase and segmentations are taken directly from the TOP-BRAIN dataset (TopBrain Segmentation Challenge for Whole Brain Vessel Anatomy), which is distributed under a license requiring source attribution. This dataset contains voxel annotations for over 40 landmark brain vessel anatomies covering both arteries and veins.If interested, you may display a default 3D view of the segmentations via the settings button in the bottom right corner of the DicomTube player.License: opendata.swiss Open use. Must provide the source. Use for commercial purposes requires permission of the data owner.Citation:TopBrain Challenge: TopBrain Challenge Organizers. (2025). TopBrain Challenge Data Release [Data set]. Zenodo. https://doi.org/10.5281/zenodo.16878417TopCoW Challenge pre-print: Benchmarking the CoW with the TopCoW Challenge: Topology-Aware Anatomical Segmentation of the Circle of Willis for CTA and MRA. Kaiyuan Yang et. al. 2025. arXiv 2312.17670
HeadCT
Intracranial Vessel Anatomy (CTA) from TOP-BRAIN Dataset (002)
111 views6 months agoCase and segmentations are taken directly from the TOP-BRAIN dataset (TopBrain Segmentation Challenge for Whole Brain Vessel Anatomy), which is distributed under a license requiring source attribution. This dataset contains voxel annotations for over 40 landmark brain vessel anatomies covering both arteries and veins.If interested, you may display a default 3D view of the segmentations via the settings button in the bottom right corner of the DicomTube player.License: opendata.swiss Open use. Must provide the source. Use for commercial purposes requires permission of the data owner.Citation:TopBrain Challenge: TopBrain Challenge Organizers. (2025). TopBrain Challenge Data Release [Data set]. Zenodo. https://doi.org/10.5281/zenodo.16878417TopCoW Challenge pre-print: Benchmarking the CoW with the TopCoW Challenge: Topology-Aware Anatomical Segmentation of the Circle of Willis for CTA and MRA. Kaiyuan Yang et. al. 2025. arXiv 2312.17670
HeadCT
Intracranial Vessel Anatomy (CTA) from TOP-BRAIN Dataset (001)
181 views6 months agoCase and segmentations are taken directly from the TOP-BRAIN dataset (TopBrain Segmentation Challenge for Whole Brain Vessel Anatomy), which is distributed under a license requiring source attribution. This dataset contains voxel annotations for over 40 landmark brain vessel anatomies covering both arteries and veins.If interested, you may display a default 3D view of the segmentations via the settings button in the bottom right corner of the DicomTube player.License: opendata.swiss Open use. Must provide the source. Use for commercial purposes requires permission of the data owner.Citation:TopBrain Challenge: TopBrain Challenge Organizers. (2025). TopBrain Challenge Data Release [Data set]. Zenodo. https://doi.org/10.5281/zenodo.16878417TopCoW Challenge pre-print: Benchmarking the CoW with the TopCoW Challenge: Topology-Aware Anatomical Segmentation of the Circle of Willis for CTA and MRA. Kaiyuan Yang et. al. 2025. arXiv 2312.17670
HeadCT
Glioblastoma, IDH-wildtype (UCSF-PDGM-541)
69 views6 months agoCase: UCSF-PDGM-541 Clinical Information: WHO CNS Grade: 4 Pathology: Glioblastoma, IDH-wildtype Molecular Markers: MGMT Status: negative (Index: 0) IDH: wildtype 1p/19q: intact This case is part of the UCSF-PDGM dataset, featuring standardized 3T brain tumor MRI with advanced diffusion and perfusion imaging. License: CC BY 4.0 Citation: Calabrese, E., Villanueva-Meyer, J., Rudie, J., Rauschecker, A., Baid, U., Bakas, S., Cha, S., Mongan, J., Hess, C. (2022). The University of California San Francisco Preoperative Diffuse Glioma MRI (UCSF-PDGM) (Version 5) [dataset]. The Cancer Imaging Archive. https://doi.org/10.7937/tcia.bdgf-8v37 If you use this case or dataset, you must also abide by the TCIA Data Usage Policies and Restrictions.
BrainMRI
Oligodendroglioma, IDH-mutant, 1p/19q-codeleted (UCSF-PDGM-540)
75 views6 months agoCase: UCSF-PDGM-540 Clinical Information: WHO CNS Grade: 2 Pathology: Oligodendroglioma, IDH-mutant, 1p/19q-codeleted Molecular Markers: MGMT Status: positive (Index: 17) IDH: IDH1 p.R132H 1p/19q: co-deletion This case is part of the UCSF-PDGM dataset, featuring standardized 3T brain tumor MRI with advanced diffusion and perfusion imaging. License: CC BY 4.0 Citation: Calabrese, E., Villanueva-Meyer, J., Rudie, J., Rauschecker, A., Baid, U., Bakas, S., Cha, S., Mongan, J., Hess, C. (2022). The University of California San Francisco Preoperative Diffuse Glioma MRI (UCSF-PDGM) (Version 5) [dataset]. The Cancer Imaging Archive. https://doi.org/10.7937/tcia.bdgf-8v37 If you use this case or dataset, you must also abide by the TCIA Data Usage Policies and Restrictions.
BrainMRI
Glioblastoma, IDH-wildtype (UCSF-PDGM-536)
23 views6 months agoCase: UCSF-PDGM-536 Clinical Information: WHO CNS Grade: 4 Pathology: Glioblastoma, IDH-wildtype Molecular Markers: MGMT Status: positive (Index: 16) IDH: wildtype 1p/19q: intact This case is part of the UCSF-PDGM dataset, featuring standardized 3T brain tumor MRI with advanced diffusion and perfusion imaging. License: CC BY 4.0 Citation: Calabrese, E., Villanueva-Meyer, J., Rudie, J., Rauschecker, A., Baid, U., Bakas, S., Cha, S., Mongan, J., Hess, C. (2022). The University of California San Francisco Preoperative Diffuse Glioma MRI (UCSF-PDGM) (Version 5) [dataset]. The Cancer Imaging Archive. https://doi.org/10.7937/tcia.bdgf-8v37 If you use this case or dataset, you must also abide by the TCIA Data Usage Policies and Restrictions.
BrainMRI
Oligodendroglioma, IDH-mutant, 1p/19q-codeleted (UCSF-PDGM-535)
12 views6 months agoCase: UCSF-PDGM-535 Clinical Information: WHO CNS Grade: 3 Pathology: Oligodendroglioma, IDH-mutant, 1p/19q-codeleted Molecular Markers: MGMT Status: unknown IDH: IDH1 p.R132H 1p/19q: relative co-deletion This case is part of the UCSF-PDGM dataset, featuring standardized 3T brain tumor MRI with advanced diffusion and perfusion imaging. License: CC BY 4.0 Citation: Calabrese, E., Villanueva-Meyer, J., Rudie, J., Rauschecker, A., Baid, U., Bakas, S., Cha, S., Mongan, J., Hess, C. (2022). The University of California San Francisco Preoperative Diffuse Glioma MRI (UCSF-PDGM) (Version 5) [dataset]. The Cancer Imaging Archive. https://doi.org/10.7937/tcia.bdgf-8v37 If you use this case or dataset, you must also abide by the TCIA Data Usage Policies and Restrictions.
BrainMRI
Glioblastoma, IDH-wildtype (UCSF-PDGM-533)
10 views6 months agoCase: UCSF-PDGM-533 Clinical Information: WHO CNS Grade: 4 Pathology: Glioblastoma, IDH-wildtype Molecular Markers: MGMT Status: positive (Index: 16) IDH: wildtype 1p/19q: intact This case is part of the UCSF-PDGM dataset, featuring standardized 3T brain tumor MRI with advanced diffusion and perfusion imaging. License: CC BY 4.0 Citation: Calabrese, E., Villanueva-Meyer, J., Rudie, J., Rauschecker, A., Baid, U., Bakas, S., Cha, S., Mongan, J., Hess, C. (2022). The University of California San Francisco Preoperative Diffuse Glioma MRI (UCSF-PDGM) (Version 5) [dataset]. The Cancer Imaging Archive. https://doi.org/10.7937/tcia.bdgf-8v37 If you use this case or dataset, you must also abide by the TCIA Data Usage Policies and Restrictions.
BrainMRI
Glioblastoma, IDH-wildtype (UCSF-PDGM-532)
10 views6 months agoCase: UCSF-PDGM-532 Clinical Information: WHO CNS Grade: 4 Pathology: Glioblastoma, IDH-wildtype Molecular Markers: MGMT Status: negative (Index: 0) IDH: wildtype 1p/19q: intact This case is part of the UCSF-PDGM dataset, featuring standardized 3T brain tumor MRI with advanced diffusion and perfusion imaging. License: CC BY 4.0 Citation: Calabrese, E., Villanueva-Meyer, J., Rudie, J., Rauschecker, A., Baid, U., Bakas, S., Cha, S., Mongan, J., Hess, C. (2022). The University of California San Francisco Preoperative Diffuse Glioma MRI (UCSF-PDGM) (Version 5) [dataset]. The Cancer Imaging Archive. https://doi.org/10.7937/tcia.bdgf-8v37 If you use this case or dataset, you must also abide by the TCIA Data Usage Policies and Restrictions.
BrainMRI